CDS

Accession Number TCMCG006C55949
gbkey CDS
Protein Id XP_013724418.1
Location join(<25700977..25701020,25701294..25701372,25701529..25701644,25701731..25701781,25701890..25702009,25702118..25702234,25702376..25702523,25703047..25703217,25703289..25703435,25703508..25703614,25703774..25703785,25703976..25704057,25704261..25704402,25704562..25704730,25704819..25704935,25705033..25705396)
Gene LOC106428211
GeneID 106428211
Organism Brassica napus

Protein

Length 661aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013868964.1
Definition uncharacterized protein LOC106428211, partial [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Rhamnogalacturonate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
TACGTTCTAATTTTCGTTCTTCCAGGTGTTTTCAGAACGTCAAGAAACAAGTTAGGCATCGCAAAGCCGGAACAGAAGCTCGCATCTGGCCGACTTACGCTTAAAAAAGTTGGTCCTAATCAAGTGGTCGTTGATAACGGTATCATCCAAGTTACCTTCTCAAGTCCACAAGGTTTAATAACTGGAATCAAGTACAAGGGCTTTGACAATGTGTTGAACAACAAAATTAAAAATCGTGGGTATTGGGACGTAATGTGGTATGAACCAGGACAAGAACAACTTATCGATCTTTTAGAAGGAGTAAAATTCAACGTCATAAATCAAACAAGTGAGCATGTTGAGATTTCATTTTCACGAGCTTGGAAGATTTCTCAACGTGGCTCACTGGTCCCGTTAAATGTAGACAAACGATATATAATTCGAAGAGGGGTATCTGGAATATACATGTACGCTGTGTTAGAGAAGTTAAAAGGCTGGCCAACTGTGGACATGGACCAAACCAGGATCGTCTTCAAGCTTAACACAAAATTTGATTTTATGGCTATATCTGATCAACGGCAAAAAATTATGCCTTCTGAAATCGATCGAGATATTACTAATAAGCGTGCTAATCCATTAGCTTATAAAGAAGCTGTTCGTTTGATAAATCCCCAAAATCGTATATTTAAAGGGCAGGTTGACGATAAGTATATGTACTCGATGGAAAACAAAGACAACAAAGTACATGGCTGGATCTCGTCCGACCAACGTGTCGGCTTCTGGATGATTACTCCCAGCGATGAGTTTCGTGTCTGTGGGCCCCCCAAACAAGAACTAACTTCTCATGTTGGACCCACCACACTCTCCATGTTTACAAGTTTACATTACGCGGGGAAAGATATGAACACAACTTATACAAGCATGGAGCCGTGGAAGAAGGTGTATGGTCCTGTCTTTGTTTATCTCAACTCTGCCTCCTCTCCTAATCGTCTCTGGACCGATGCTAAACGACAGATGGTTGCGGAGGTTCATAGTTGGCCATATGATTTCGTGAAGTCAGTAGATTACCCTCTTCATCAACAAAGAGGGACGGTCAAAGGTCAATTCTTTGTAATGGACAGATACATAAGCAACAAGTCGAAGTTATTTGGGAAATTTGCTTTTGTGGGTTTAGCAATGCCCGGTAAAGCTGGTTCATGGCAAACCGAAAACAAGGGATATCAATTTTGGACAACAGCTGACAGAATGGGGATATTCACAATAACGAATGTGAGACCAGGGAGTTATAATCTATATGCATGGGTTTCTGGACATATTGGTGACTATAAATACGAGCGTGACATTACCATCACACCAGGCAGGGAGATAGACGTAGGAGCCATACTGTATGAGCCGCCCAGAATCGGCGCTACACTGTGGGAAATCGGAAAACCAGACCGGACTGCTGCAGAATTCTATATCCCAGATCCGGACCCAACCCTTTCGACCAAACTCTATCTTAATAACTCTTATCAACCTCAAGACCGATTTAGACAATATGGTCTATGGGATCGGTACACTGCTTTGTATCCTCGAAATGATCTTGTTTATATTGTTGGAGTAAGTGATTATAAAAAAGACTGGTTCTATGCACATGTGACCAGAAATGCTGGAAATGGGACATATCAAGCAACGACATGGCAAATTGTGTTTAGATTGAAAGCAGTGATTAAAACTGGGAACTACACGTTTCGAATGGCTTTGGCTGCAGTCACGACTGCAAATTTATCTGTTCGGATCAACGTACCTACGTCCAAACCTATTTTCATGATTGGGCTAATAGGTCAAGATAACGCGATCGCTAGACATGGGATTCATGGGTTATACAACTTGTATGATATCAATGTTGGTGGAAACTTACTTAGGGTTGGTAATAATACGATTTTTCTCACTCAAGATCGGAGATGGGGATCGTTTACAGGTGTTATGTATGATTATCTACGTCTGGAAAGTCCTCAGGAAGTTTGA
Protein:  
YVLIFVLPGVFRTSRNKLGIAKPEQKLASGRLTLKKVGPNQVVVDNGIIQVTFSSPQGLITGIKYKGFDNVLNNKIKNRGYWDVMWYEPGQEQLIDLLEGVKFNVINQTSEHVEISFSRAWKISQRGSLVPLNVDKRYIIRRGVSGIYMYAVLEKLKGWPTVDMDQTRIVFKLNTKFDFMAISDQRQKIMPSEIDRDITNKRANPLAYKEAVRLINPQNRIFKGQVDDKYMYSMENKDNKVHGWISSDQRVGFWMITPSDEFRVCGPPKQELTSHVGPTTLSMFTSLHYAGKDMNTTYTSMEPWKKVYGPVFVYLNSASSPNRLWTDAKRQMVAEVHSWPYDFVKSVDYPLHQQRGTVKGQFFVMDRYISNKSKLFGKFAFVGLAMPGKAGSWQTENKGYQFWTTADRMGIFTITNVRPGSYNLYAWVSGHIGDYKYERDITITPGREIDVGAILYEPPRIGATLWEIGKPDRTAAEFYIPDPDPTLSTKLYLNNSYQPQDRFRQYGLWDRYTALYPRNDLVYIVGVSDYKKDWFYAHVTRNAGNGTYQATTWQIVFRLKAVIKTGNYTFRMALAAVTTANLSVRINVPTSKPIFMIGLIGQDNAIARHGIHGLYNLYDINVGGNLLRVGNNTIFLTQDRRWGSFTGVMYDYLRLESPQEV